Annuaire IPHC

DSA | Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO) » Publications

Publications

2016

Armand, L., Biola-Clier, M., Bobyk, L., Collin-Faure, V., Diemer, H., Strub, J. M., Cianferani, S., Van Dorsselaer, A., Herlin-Boime, N., Rabilloud, T. & Carriere, M. (2016). Molecular responses of alveolar epithelial A549 cells to chronic exposure to titanium dioxide nanoparticles : A proteomic view. J. Proteom. 134, 163-173. doi : http://dx.doi.org/10.1016/j.jprot.2015.08.006.

Aude-Garcia, C., Dalzon, B., Ravanat, J. L., Collin-Faure, V., Diemer, H., Strub, J. M., Cianferani, S., Van Dorsselaer, A., Carriere, M. & Rabilloud, T. (2016). A combined proteomic and targeted analysis unravels new toxic mechanisms for zinc oxide nanoparticles in macrophages. J. Proteom. 134, 174-185. doi : http://dx.doi.org/10.1016/j.jprot.2015.12.013.

Beck, A., Terral, G., Debaene, F., Wagner-Rousset, E., Marcoux, J., Janin-Bussat, M. C., Colas, O., Van Dorsselaer, A. & Cianferani, S. (2016). Cutting-edge mass spectrometry methods for the multi-level structural characterization of antibody-drug conjugates. Expert Review of Proteomics 13, 157-183. doi : http://dx.doi.org/10.1586/14789450.2016.1132167.

Bragantini, B., Tiotiu, D., Rothe, B., Saliou, J. M., Marty, H., Cianferani, S., Charpentier, B., Quinternet, M. & Manival, X. (2016). Functional and Structural Insights of the Zinc-Finger HIT protein family members Involved in Box C/D snoRNP Biogenesis. J. Mol. Biol. 428, 2488-2506. doi : http://dx.doi.org/10.1016/j.jmb.2016.04.028.

Hovasse, A., Alayi, T. D., Van Dorsselaer, A., Marchal, R., Jegou, S. & Schaeffer-Reiss, C. (2016). In-depth glycoproteomic characterisation of grape berry vacuolar invertase using a combination of mass spectrometry-based approaches. Food Chem. 200, 237-244. doi : http://dx.doi.org/10.1016/j.foodchem.2016.01.024.

Lanshoeft, C., Heudi, O. & Cianferani, S. (2016). SMART Digest (TM) compared with pellet digestion for analysis of human immunoglobulin G1 in rat serum by liquid chromatography tandem mass spectrometry. Anal. Biochem. 501, 23-25. doi : http://dx.doi.org/10.1016/j.ab.2016.02.006.

Lanshoeft, C., Heudi, O., Cianferani, S., Warren, A. P., Picard, F. & Kretz, O. (2016). Quantitative analysis of hIgG1 in monkey serum by LC-MS/MS using mass spectrometric immunoassay. Bioanalysis 8, 1035-1049. doi : http://dx.doi.org/10.4155/bio.16.32.

Lanshoeft, C., Wolf, T., Heudi, O., Cianferani, S., Barteau, S., Walles, M., Picard, F. & Kretz, O. (2016). The use of generic surrogate peptides for the quantitative analysis of human immunoglobulin G1 in pre-clinical species with high-resolution mass spectrometry. Anal. Bioanal. Chem. 408, 1687-1699. doi : http://dx.doi.org/10.1007/s00216-015-9286-x.

Lederer, M., Hahn, U., Strub, J. M., Cianferani, S., Van Dorsselaer, A., Nierengarten, J. F., Torres, T. & Guldi, D. M. (2016). Probing Supramolecular Interactions between a Crown Ether Appended Zinc Phthalocyanine and an Ammonium Group Appended to a C-60 Derivative. Chem. Eur. J. 22, 2051-2059. doi : http://dx.doi.org/10.1002/chem.201503315.

Luche, S., Eymard-Vernain, E., Diemer, H., Van Dorsselaer, A., Rabilloud, T. & Lelong, C. (2016). Zinc oxide induces the stringent response and major reorientations in the central metabolism of Bacillus subtilis. J. Proteom. 135, 170-180. doi : http://dx.doi.org/10.1016/j.jprot.2015.07.018.

Plumel, M. I., Benhaim-Delarbre, M., Rompais, M., Thiersé, D., Sorci, G., Van Dorsselaer, A., Criscuolo, F. & Bertile, F. (2016). Differential proteomics reveals age-dependent liver oxidative costs of innate immune activation in mice. J. Proteom. 135, 181-190. doi : http://dx.doi.org/10.1016/j.jprot.2015.09.008.

Ramus, C., Hovasse, A., Marcellin, M., Hesse, A. M., Mouton-Barbosa, E., Bouyssie, D., Vaca, S., Carapito, C., Chaoui, K., Bruley, C., Garin, J., Cianferani, S., Ferro, M., Van Dorssaeler, A., Burlet-Schiltz, O., Schaeffer, C., Coute, Y. & De Peredo, A. G. (2016). Benchmarking quantitative label-free LC-MS data processing workflows using a complex spiked proteomic standard dataset. J. Proteom. 132, 51-62. doi : http://dx.doi.org/10.1016/j.jprot.2015.11.011.

Sangare, L. O., Alayi, T. D., Westermann, B., Hovasse, A., Sindikubwabo, F., Callebaut, I., Werkmeister, E., Lafont, F., Slomianny, C., Hakimi, M. A., Van Dorsselaer, A., Schaeffer-Reiss, C. & Tomavo, S. (2016). Unconventional endosome-like compartment and retromer complex in Toxoplasma gondii govern parasite integrity and host infection. Nat. Commun. 7, 11191. doi : http://dx.doi.org/10.1038/ncomms11191.

Sigwalt, D., Caballero, R., Holler, M., Strub, J. M., Van Dorsselaer, A. & Nierengarten, J. F. (2016). Ultra-Fast Dendritic Growth Based on the Grafting of Fullerene Hexa-Adduct Macromonomers onto a Fullerene Core. Eur. J. Org. Chem., 2882-2887. doi : http://dx.doi.org/10.1002/ejoc.201600439.

Soty, M., Chilloux, J., Delalande, F., Zitoun, C., Bertile, F., Mithieux, G. & Gautier-Stein, A. (2016). Post-Translational Regulation of the Glucose-6-Phosphatase Complex by Cyclic Adenosine Monophosphate Is a Crucial Determinant of Endogenous Glucose Production and Is Controlled by the Glucose-6-Phosphate Transporter. J. Proteom. Res. 15, 1342-1349. doi : http://dx.doi.org/10.1021/acs.jproteome.6b00110.

Thebault, S., Agez, M., Chi, X. K., Stojko, J., Cura, V., Telerman, S. B., Maillet, L., Gautier, F., Billas-Massobrio, I., Birck, C., Troffer-Charlier, N., Karafin, T., Honore, J., Senff-Ribeiro, A., Montessuit, S., Johnson, C. M., Juin, P., Cianferani, S., Martinou, J. C., Andrews, D. W., Amson, R., Telerman, A. & Cavarelli, J. (2016). TCTP contains a BH3-like domain, which instead of inhibiting, activates Bcl-xL. Sci. Rep. 6, 19725. doi : http://dx.doi.org/10.1038/srep19725.


2015

Ait-Ali, N., Fridlich, R., Millet-Puel, G., Clerin, E., Delalande, F., Jaillard, C., Blond, F., Perrocheau, L., Reichman, S., Byrne, L. C., Olivier-Bandini, A., Bellalou, J., Moyse, E., Bouillaud, F., Nicol, X., Dalkara, D., Van Dorsselaer, A., Sahel, J. A. & Leveillard, T. (2015). Rod-Derived Cone Viability Factor Promotes Cone Survival by Stimulating Aerobic Glycolysis. Cell 161, 817-832. doi : http://dx.doi.org/10.1016/j.cell.2015.03.023.

Arsene-Ploetze, F., Bertin, P. N. & Carapito, C. (2015). Proteomic tools to decipher microbial community structure and functioning. Environ. Sci. Pollution Res. 22, 13599-13612. doi : http://dx.doi.org/10.1007/s11356-014-3898-0.

Ayoub, D., Bertaccini, D., Diemer, H., Wagner-Rousset, E., Colas, O., Cianferani, S., Van Dorsselaer, A., Beck, A. & Schaeffer-Reiss, C. (2015). Characterization of the N-Terminal Heterogeneities of Monoclonal Antibodies Using In-Gel Charge Derivatization of alpha-Amines and LC-MS/MS. Anal. Chem. 87, 3784-3790. doi : http://dx.doi.org/10.1021/ac504427k.

Beck, A., Debaene, F., Diemer, H., Wagner-Rousset, E., Colas, O., Van Dorsselaer, A. & Cianferani, S. (2015). Cutting-edge mass spectrometry characterization of originator, biosimilar and biobetter antibodies. J. Mass Spectrom. 50, 285-297. doi : http://dx.doi.org/10.1002/jms.3554.

Bonnefond, L., Stojko, J., Mailliot, J., Troffer-Charlier, N., Cura, V., Wurtz, J. M., Cianferani, S. & Cavarelli, J. (2015). Functional insights from high resolution structures of mouse protein arginine methyltransferase 6. J. Struct. Biol. 191, 175-183. doi : http://dx.doi.org/10.1016/j.jsb.2015.06.017.

Carapito, C., Lane, L., Benama, M., Opsomer, A., Mouton-Barbosa, E., Garrigues, L., De Peredo, A. G., Burel, A., Bruley, C., Gateau, A., Bouyssie, D., Jaquinod, M., Cianferani, S., Burlet-Schiltz, O., Van Dorsselaer, A., Garin, J. & Vandenbrouck, Y. (2015). Computational and Mass-Spectrometry-Based Workflow for the Discovery and Validation of Missing Human Proteins : Application to Chromosomes 2 and 14. J. Proteom. Res. 14, 3621-3634. doi : http://dx.doi.org/10.1021/pr5010345.

Dorier, M., Brun, E., Veronesi, G., Barreau, F., Pernet-Gallay, K., Desvergne, C., Rabilloud, T., Carapito, C., Herlin-Boime, N. & Carriere, M. (2015). Impact of anatase and rutile titanium dioxide nanoparticles on uptake carriers and efflux pumps in Caco-2 gut epithelial cells. Nanoscale 7, 7352-7360. doi : http://dx.doi.org/10.1039/c5nr00505a.

Ethuin, P., Marlard, S., Delosiere, M., Carapito, C., Delalande, F., Van Dorsselaer, A., Dehaut, A., Lencel, V., Duflos, G. & Grard, T. (2015). Differentiation between fresh and frozen-thawed sea bass (Dicentrarchus labrax) fillets using two-dimensional gel electrophoresis. Food Chem. 176, 294-301. doi : http://dx.doi.org/10.1016/j.foodchem.2014.12.065.

Jakobi, S., Nguyen, P. T. X., Debaene, F., Cianferani, S., Reuter, K. & Klebe, G. (2015). What Glues a Homodimer Together : Systematic Analysis of the Stabilizing Effect of an Aromatic Hot Spot in the Protein-Protein Interface of the tRNA-Modifying Enzyme Tgt. ACS Chem. Biol. 10, 1897-1907. doi : http://dx.doi.org/10.1021/acschembio.5b00028.

Kern, A., Schnell, G., Bernard, Q., Boeuf, A., Jaulhac, B., Collin, E., Barthel, C., Ehret-Sabatier, L. & Boulanger, N. (2015). Heterogeneity of Borrelia burgdorferi Sensu Stricto Population and Its Involvement in Borrelia Pathogenicity : Study on Murine Model with Specific Emphasis on the Skin Interface. Plos One 10, e0133195. doi : http://dx.doi.org/10.1371/journal.pone.0133195.

Kolodych, S., Koniev, O., Baatarkhuu, Z., Bonnefoy, J.-Y., Debaene, F., Cianferani, S., Van Dorsselaer, A. & Wagner, A. (2015). CBTF : New Amine-to-Thiol Coupling Reagent for Preparation of Antibody Conjugates with Increased Plasma Stability. Bioconjugate Chem. 26, 197-200. doi : http://dx.doi.org/10.1021/bc500610g.

Koniev, O., Kolodych, S., Baatarkhuu, Z., Stojko, J., Eberova, J., Bonnefoy, J. Y., Cianferani, S., Van Dorsselaer, A. & Wagner, A. (2015). MAPN : First-in-Class Reagent for Kinetically Resolved Thiol-to-Thiol Conjugation. Bioconjugate Chem. 26, 1863-1867. doi : http://dx.doi.org/10.1021/acs.bioconjchem.5b00440.

Leveillard, T., Van Dorsselaer, A. & Sahel, J. A. (2015). Altruism in the retina : sticks feed cones. M S-Med. Sci. 31, 828-830. doi : http://dx.doi.org/10.1051/medsci/20153110005.

Marcoux, J., Champion, T., Colas, O., Wagner-Rousset, E., Corvaia, N., Van Dorsselaer, A., Beck, A. & Cianferani, S. (2015). Native mass spectrometry and ion mobility characterization of trastuzumab emtansine, a lysine-linked antibody drug conjugate. Protein Sci. 24, 1210-1223. doi : http://dx.doi.org/10.1002/pro.2666.

Marcoux, J. & Cianferani, S. (2015). Towards integrative structural mass spectrometry : Benefits from hybrid approaches. Methods 89, 4-12. doi : http://dx.doi.org/10.1016/j.ymeth.2015.05.024.

Marcoux, J., Mangione, P. P., Porcari, R., Degiacomi, M. T., Verona, G., Taylor, G. W., Giorgetti, S., Raimondi, S., Sanglier-Cianferani, S., Benesch, J. L. P., Cecconi, C., Naqvi, M. M., Gillmore, J. D., Hawkins, P. N., Stoppini, M., Robinson, C. V., Pepys, M. B. & Bellotti, V. (2015). A novel mechano-enzymatic cleavage mechanism underlies transthyretin amyloidogenesis. EMBO Mol. Med. 7, 1337-1349. doi : http://dx.doi.org/10.15252/emmm.201505357.

Martin, P., Dubois, C., Jacquier, E., Dion, S., Mancini-Bourgine, M., Godon, O., Kratzer, R., Lelu-Santolaria, K., Evlachev, A., Meritet, J. F., Schlesinger, Y., Villeval, D., Strub, J. M., Van Dorsselaer, A., Marchand, J. B., Geist, M., Brandely, R., Findeli, A., Boukhebza, H., Menguy, T., Silvestre, N., Michel, M. L. & Inchauspe, G. (2015). TG1050, an immunotherapeutic to treat chronic hepatitis B, induces robust T cells and exerts an antiviral effect in HBV-persistent mice. Gut 64, 1961-1971. doi : http://dx.doi.org/10.1136/gutjnl-2014-308041.

Martinez-Zapien, D., Saliou, J. M., Han, X., Atmanene, C., Proux, F., Cianferani, S. & Dock-Bregeon, A. C. (2015). Intermolecular recognition of the non-coding RNA 7SK and HEXIM protein in perspective. Biochimie 117, 63-71. doi : http://dx.doi.org/10.1016/j.biochi.2015.03.020.

Quinternet, M., Rothe, B., Barbier, M., Bobo, C., Saliou, J. M., Jacquemin, C., Back, R., Chagot, M. E., Cianferani, S., Meyer, P., Branlant, C., Charpentier, B. & Manival, X. (2015). Structure/Function Analysis of Protein-Protein Interactions Developed by the Yeast Pih1 Platform Protein and Its Partners in Box C/D snoRNP Assembly. J. Mol. Biol. 427, 2816-2839. doi : http://dx.doi.org/10.1016/j.jmb.2015.07.012.

Saliou, J. M., Manival, X., Tillault, A. S., Atmanene, C., Bobo, C., Branlant, C., Van Dorsselaer, A., Charpentier, B. & Cianferani, S. (2015). Combining native MS approaches to decipher archaeal box H/ACA ribonucleoprotein particle structure and activity. Proteomics 15, 2851-2861. doi : http://dx.doi.org/10.1002/pmic.201400529.

Schnell, G., Boeuf, A., Jaulhac, B., Boulanger, N., Collin, E., Barthel, C., De Martino, S. & Ehret-Sabatier, L. (2015). Proteomic analysis of three Borrelia burgdorferi sensu lato native species and disseminating clones : Relevance for Lyme vaccine design. Proteomics 15, 1280-1290. doi : http://dx.doi.org/10.1002/pmic.201400177.

Schnell, G., Boeuf, A., Westermann, B., Jaulhac, B., Lipsker, D., Carapito, C., Boulanger, N. & Ehret-Sabatier, L. (2015). Discovery and Targeted Proteomics on Cutaneous Biopsies Infected by Borrelia to Investigate Lyme Disease. Mol. Cell. Proteomics 14, 1254-1264. doi : http://dx.doi.org/10.1074/mcp.M114.046540.

Simonneau, C., Leclercq, B., Mougel, A., Adriaenssens, E., Paquet, C., Raibaut, L., Ollivier, N., Drobecq, H., Marcoux, J., Cianferani, S., Tulasne, D., De Jonge, H., Melnyk, O. & Vicogne, J. (2015). Semi-synthesis of a HGF/SF kringle one (K1) domain scaffold generates a potent in vivo MET receptor agonist. Chem. Sci. 6, 2110-2121. doi : http://dx.doi.org/10.1039/c4sc03856h.

Stojko, J., Fieulaine, S., Petiot-Becard, S., Van Dorsselaer, A., Meinnel, T., Giglione, C. & Cianferani, S. (2015). Ion mobility coupled to native mass spectrometry as a relevant tool to investigate extremely small ligand-induced conformational changes. Analyst 140, 7234-7245. doi : http://dx.doi.org/10.1039/c5an01311a.

Triboulet, S., Aude-Garcia, C., Armand, L., Collin-Faure, V., Chevallet, M., Diemer, H., Gerdil, A., Proamer, F., Strub, J. M., Habert, A., Herlin, N., Van Dorsselaer, A., Carriere, M. & Rabilloud, T. (2015). Comparative Proteomic Analysis of the Molecular Responses of Mouse Macrophages to Titanium Dioxide and Copper Oxide Nanoparticles Unravels Some Toxic Mechanisms for Copper Oxide Nanoparticles in Macrophages. Plos One 10, e0124496. doi : http://dx.doi.org/10.1371/journal.pone.0124496.

Vaca Jacome, A. S., Rabilloud, T., Schaeffer-Reiss, C., Rompais, M., Ayoub, D., Lane, L., Bairoch, A., Van Dorsselaer, A. & Carapito, C. (2015). N-terminome analysis of the human mitochondrial proteome. Proteomics 15, 2519-2524. doi : http://dx.doi.org/10.1002/pmic.201400617.


2014

Abada, S., Lecointre, A., Christine, C., Ehret-Sabatier, L., Saupe, F., Orend, G., Brasse, D., Ouadi, A., Hussenet, T., Laquerrière, P., Elhabiri, M. & Charbonnière, L. J. (2014). Phosphonated Chelates for Nuclear Imaging. Org. Biomol. Chem. 12, 9601-9620. doi : http://dx.doi.org/10.1039/c4ob01514b.

Alayi, T. D., Van Dorsselaer, A., Epting, T., Bisse, E. & Schaeffer-Reiss, C. (2014). Hb A(2)-Konz delta 50(D1)Ser -> Thr ; HBD : c.151T > A : a New delta Chain Hemoglobin Variant Characterized by Mass Spectrometry and High Performance Liquid Chromatography. Hemoglobin 38, 133-136. doi : http://dx.doi.org/10.3109/03630269.2014.880063.

Brun, E., Barreau, F., Veronesi, G., Fayard, B., Sorieul, S., Chaneac, C., Carapito, C., Rabilloud, T., Mabondzo, A., Herlin-Boime, N. & Carriere, M. (2014). Titanium dioxide nanoparticle impact and translocation through ex vivo, in vivo and in vitro gut epithelia. Part. Fibre Toxicol. 11, 13. doi : http://dx.doi.org/10.1186/1743-8977-11-13.

Carapito, C., Burel, A., Guterl, P., Walter, A., Varrier, F., Bertile, F. & Van Dorsselaer, A. (2014). MSDA, a proteomics software suite for in-depth Mass Spectrometry Data Analysis using grid computing. Proteomics 14, 1014-1019. doi : http://dx.doi.org/10.1002/pmic.201300415.

Cebron, A., Arsene-Ploetze, F., Bauda, P., Bertin, P. N., Billard, P., Carapito, C., Devin, S., Goulhen-Chollet, F., Poirel, J. & Leyval, C. (2014). Rapid Impact of Phenanthrene and Arsenic on Bacterial Community Structure and Activities in Sand Batches. Microb. Ecol. 67, 129-144. doi : http://dx.doi.org/10.1007/s00248-013-0313-1.

Cotte, V., Sabatier, L., Schnell, G., Carmi-Leroy, A., Rousselle, J. C., Arsene-Ploetze, F., Malandrin, L., Sertour, N., Namane, A., Ferquel, E. & Choumet, V. (2014). Differential expression of Ixodes ricinus salivary gland proteins in the presence of the Borrelia burgdorferi sensu lato complex. J. Proteom. 96, 29-43. doi : http://dx.doi.org/10.1016/j.jprot.2013.10.033.

Debaene, F., Boeuf, A., Wagner-Rousset, E., Colas, O., Ayoub, D., Corvaia, N., Van Dorsselaer, A., Beck, A. & Cianferani, S. (2014). Innovative Native MS Methodologies for Antibody Drug Conjugate Characterization : High Resolution Native MS and IM-MS for Average DAR and DAR Distribution Assessment. Anal. Chem. 86, 10674-10683. doi : http://dx.doi.org/10.1021/ac502593n.

Debeire, P., Delalande, F., Habrylo, O., Jeltsch, J. M., Van Dorsselaer, A. & Phalip, V. (2014). Enzymatic cocktails produced by Fusarium graminearum under submerged fermentation using different lignocellulosic biomasses. FEMS Microbiol. Lett. 355, 116-123. doi : http://dx.doi.org/10.1111/1574-6968.12467.

Feve, M., Saliou, J. M., Zeniou, M., Lennon, S., Carapito, C., Dong, J. H., Van Dorsselaer, A., Junier, M. P., Chneiweiss, H., Cianferani, S., Haiech, J. & Kilhoffer, M. C. (2014). Comparative Expression Study of the Endo-G Protein Coupled Receptor (GPCR) Repertoire in Human Glioblastoma Cancer Stem-like Cells, U87-MG Cells and Non Malignant Cells of Neural Origin Unveils New Potential Therapeutic Targets. Plos One 9, e91519. doi : http://dx.doi.org/10.1371/journal.pone.0091519.

Herissant, L., Moehle, E. A., Bertaccini, D., Van Dorsselaer, A., Schaeffer-Reiss, C., Guthrie, C. & Dargemont, C. (2014). H2B ubiquitylation modulates spliceosome assembly and function in budding yeast. Biol. Cell 106, 126-138. doi : http://dx.doi.org/10.1111/boc.201400003.

Jakobi, S., Nguyen, T. X. P., Debaene, F., Metz, A., Sanglier-Cianferani, S., Reuter, K. & Klebe, G. (2014). Hot-spot analysis to dissect the functional protein-protein interface of a tRNA-modifying enzyme. Proteins 82, 2713-2732. doi : http://dx.doi.org/10.1002/prot.24637.

Jemaa, M., Morin, N., Cavelier, P., Cau, J., Strub, J. M. & Delsert, C. (2014). Adult somatic progenitor cells and hematopoiesis in oysters. J. Exp. Biol. 217, 3067-3077. doi : http://dx.doi.org/10.1242/jeb.106575.

Juste, C., Kreil, D. P., Beauvallet, C., Guillot, A., Vaca, S., Carapito, C., Mondot, S., Sykacek, P., Sokol, H., Blon, F., Lepercq, P., Levenez, F., Valot, B., Carre, W., Loux, V., Pons, N., David, O., Schaeffer, B., Lepage, P., Martin, P., Monnet, V., Seksik, P., Beaugerie, L., Ehrlich, S. D., Gibrat, J. F., Van Dorsselaer, A. & Dore, J. (2014). Bacterial protein signals are associated with Crohn’s disease. Gut 63, 1566-1577. doi : http://dx.doi.org/10.1136/gutjnl-2012-303786.

Koniev, O., Leriche, G., Nothisen, M., Remy, J. S., Strub, J. M., Schaeffer-Reiss, C., Van Dorsselaer, A., Baati, R. & Wagner, A. (2014). Selective Irreversible Chemical Tagging of Cysteine with 3-Arylpropiolonitriles. Bioconjugate Chem. 25, 202-206. doi : http://dx.doi.org/10.1021/bc400469d.

Laux-Biehlmann, A., Chung, H., Mouheiche, J., Veriepe, J., Delalande, F., Lamshoft, M., Welters, I. D., Soldevila, S., Bazin, H., Lamarque, L., Van Dorsselaer, A., Poisbeau, P., Schneider, F., Goumon, Y. & Garnero, P. (2014). Endogenous morphine-6-glucuronide (M6G) is present in the plasma of patients : Validation of a specific anti-M6G antibody for clinical and basic research. Biofactors 40, 113-120. doi : http://dx.doi.org/10.1002/biof.1107.

Leveillard, T., Fridlich, R., Clerin, E., Ait-Ali, N., Millet-Puel, G., Jaillard, C., Yang, Y., Zack, D., Van Dorsselaer, A. & Sahel, J.-A. (2014). Therapeutic strategy for handling inherited retinal degenerations in a gene-independent manner using rod-derived cone viability factors. C. R. Biol. 337, 207-213. doi : http://dx.doi.org/10.1016/j.crvi.2013.12.002.

Lien, F., Berthier, A., Bouchaert, E., Gheeraert, C., Alexandre, J., Porez, G., Prawitt, J., Dehondt, H., Ploton, M., Colin, S., Lucas, A., Patrice, A., Pattou, F., Diemer, H., Van Dorsselaer, A., Rachez, C., Kamilic, J., Groen, A. K., Staels, B. & Lefebvre, P. (2014). Metformin interferes with bile acid homeostasis through AMPK-FXR crosstalk. J. Clin. Invest. 124, 1037-1051. doi : http://dx.doi.org/10.1172/jci68815.

Liu, T., Nonat, A., Beyler, M., Regueiro-Figueroa, M., Nono, K. N., Jeannin, O., Camerel, F., Debaene, F., Cianferani-Sanglier, S., Tripier, R., Platas-Iglesias, C. & Charbonniere, L. J. (2014). Supramolecular Luminescent Lanthanide Dimers for Fluoride Sequestering and Sensing. Angew. Chem. Int. Ed. 53, 7259-7263. doi : http://dx.doi.org/10.1002/anie.201404847.

Magnin-Robert, M., Spagnolo, A., Alayi, T. D., Cilindre, C., Mercier, L., Schaeffer-Reiss, C., Van Dorsselaer, A., Clement, C. & Fontaine, F. (2014). Proteomic insights into changes in grapevine wood in response to esca proper and apoplexy. Phytopathol. Mediterr. 53, 168-187. doi : http://dx.doi.org/10.14601/Phytopathol_Mediterr-12913.

Moog, C., Dereuddre-Bosquet, N., Teillaud, J. L., Biedma, M. E., Holl, V., Van Ham, G., Heyndrickx, L., Van Dorsselaer, A., Katinger, D., Vcelar, B., Zolla-Pazner, S., Mangeot, I., Kelly, C., Shattock, R. J. & Le Grand, R. (2014). Protective effect of vaginal application of neutralizing and nonneutralizing inhibitory antibodies against vaginal SHIV challenge in macaques. Mucosal Immunol. 7, 46-56. doi : http://dx.doi.org/10.1038/mi.2013.23.

Mori, M., Nucci, A., Chiara, M., Lang, D. S., Humbert, N., Boudier, C., Debaene, F., Sanglier-Cianferani, S., Catala, M., Schult-Dietrich, P., Dietrich, U., Tisne, C., Mely, Y. & Botta, M. (2014). Functional and Structural Characterization of 2-Amino-4-phenylthiazole Inhibitors of the HIV-1 Nucleocapsid Protein with Antiviral Activity. ACS Chem. Biol. 9, 1950-1955. doi : http://dx.doi.org/10.1021/cb500316h.

Plumel, M. I., Stier, A., Thiercé, D., Van Dorsselaer, A., Criscuolo, F. & Bertile, F. (2014). Litter size manipulation in laboratory mice : an example of how proteomic analysis can uncover new mechanisms underlying the cost of reproduction. Front. Zool. 11, 41. doi : http://dx.doi.org/10.1186/1742-9994-11-41.

Ranaei-Siadat, E., Merigoux, C., Seijo, B., Ponchon, L., Saliou, J. M., Bernauer, J., Sanglier-Cianferani, S., Dardel, F., Vachette, P. & Nonin-Lecomte, S. (2014). In vivo tmRNA protection by SmpB and pre-ribosome binding conformation in solution. RNA-A PUBLICATION OF THE RNA SOCIETY 20, 1827-1827. doi : http://dx.doi.org/10.1261/rna.045674.114.

Rejon, J. D., Delalande, F., Schaeffer-Reiss, C., Carapito, C., Zienkiewicz, K., De Dios Alche, J., Isabel Rodriguez-Garcia, M., Van Dorsselaer, A. & Castro, A. J. (2014). The plant stigma exudate : a biochemically active extracellular environment for pollen germination ? Plant Sign. Behav. 9, e28274. doi : http://dx.doi.org/10.4161/psb.28274.

Rothe, B., Saliou, J. M., Quinternet, M., Back, R., Tiotiu, D., Jacquemin, C., Loegler, C., Schlotter, F., Pena, V., Eckert, K., Morera, S., Van Dorsselaer, A., Branlant, C., Massenet, S., Sanglier-Cianferani, S., Manival, X. & Charpentier, B. (2014). Protein Hit1, a novel box C/D snoRNP assembly factor, controls cellular concentration of the scaffolding protein Rsa1 by direct interaction. Nucleic Acids Res. 42, 10731-10747. doi : http://dx.doi.org/10.1093/nar/gku612.

Spagnolo, A., Larignon, P., Magnin-Robert, M., Hovasse, A., Cilindre, C., Van Dorsselaer, A., Clement, C., Schaeffer-Reiss, C. & Fontaine, F. (2014). Flowering as the Most Highly Sensitive Period of Grapevine (Vitis vinifera L. cv Mourvedre) to the Botryosphaeria Dieback Agents Neofusicoccum parvum and Diplodia seriata Infection. Int. J. Mol. Sci. 15, 9644-9669. doi : http://dx.doi.org/10.3390/ijms15069644.

Spagnolo, A., Magnin-Robert, M., Alayi, T. D., Cilindre, C., Schaeffer-Reiss, C., Van Dorsselaer, A., Clement, C., Larignon, P., Ramirez-Suero, M., Chong, J., Bertsch, C., Abou-Mansour, E. & Fontaine, F. (2014). Differential Responses of Three Grapevine Cultivars to Botryosphaeria Dieback. Phytopathology 104, 1021-1035. doi : http://dx.doi.org/10.1094/phyto-01-14-0007-r.

Triboulet, S., Aude-Garcia, C., Armand, L., Gerdil, A., Diemer, H., Proamer, F., Collin-Faure, V., Habert, A., Strub, J. M., Hanau, D., Herlin, N., Carriere, M., Van Dorsselaer, A. & Rabilloud, T. (2014). Analysis of cellular responses of macrophages to zinc ions and zinc oxide nanoparticles : a combined targeted and proteomic approach. Nanoscale 6, 6102-6114. doi : http://dx.doi.org/10.1039/c4nr00319e.

Voinot, F., Fischer, C., Schmitt, C., Ehret-Sabatier, L. & Angel, F. (2014). Controlled ingestion of kaolinite (5%) modulates enteric nitrergic innervation in rats. Fundam. Clin. Pharmacol. 28, 405-413. doi : http://dx.doi.org/10.1111/fcp.12040.

Wasselin, T., Zahn, S., Le Maho, Y., Van Dorsselaer, A., Raclot, T. & Bertile, F. (2014). Exacerbated oxidative stress in the fasting liver according to fuel partitioning. Proteomics 14, 1905-1921. doi : http://dx.doi.org/10.1002/pmic.201400051.


2013

Aslam, R., Laventie, B. J., Marban, C., Prevost, G., Keller, D., Strub, J. M., Van Dorsselaer, A., Haikel, Y., Taddei, C. & Metz-Boutigue, M. H. (2013). Activation of Neutrophils by the Two-Component Leukotoxin LukE/D from Staphylococcus aureus : Proteomic Analysis of the Secretions. J. Proteom. Res. 12, 3667-3678. doi : http://dx.doi.org/10.1021/pr400199x.

Aslam, R., Marban, C., Corazzol, C., Jehl, F., Delalande, F., Van Dorsselaer, A., Prevost, G., Haikel, Y., Taddei, C., Schneider, F. & Metz-Boutigue, M. H. (2013). Cateslytin, a Chromogranin A Derived Peptide Is Active against Staphylococcus aureus and Resistant to Degradation by Its Proteases. Plos One 8, e68993. doi : http://dx.doi.org/10.1371/journal.pone.0068993.

Atindehou, M., Lagnika, L., Guérold, B., Strub, J., Marchioni, E., Zhao, M., Van Dorsselaer, A., Haikel, Y., Sanni, A. & Metz-Boutigue, M. (2013). Isolation and Identification of Two Antibacterial Agents from Chromolaena odorata L. Active against Four Diarrheal Strains. Adv. Microbiol. 3, 115-121. doi : http://dx.doi.org/10.4236/aim.2013.31018.

Beck, A., Diemer, H., Ayoub, D., Debaene, F., Wagner-Rousset, E., Carapito, C., Van Dorsselaer, A. & Sanglier-Cianferani, S. (2013). Analytical characterization of biosimilar antibodies and Fc-fusion proteins. TRAC 48, 81-95. doi : http://dx.doi.org/10.1016/j.trac.2013.02.014.

Beck, A., Wagner-Rousset, E., Ayoub, D., Van Dorsselaer, A. & Sanglier-Cianferani, S. (2013). Characterization of Therapeutic Antibodies and Related Products. Anal. Chem. 85, 715-736. doi : http://dx.doi.org/10.1021/ac3032355.

Bertaccini, D., Vaca, S., Carapito, C., Arsene-Ploetze, F., Van Dorsselaer, A. & Schaeffer-Reiss, C. (2013). An Improved Stable Isotope N-Terminal Labeling Approach with Light/Heavy TMPP To Automate Proteogenomics Data Validation : dN-TOP. J. Proteom. Res. 12, 3063-3070. doi : http://dx.doi.org/10.1021/pr4002993.

Debaene, F., Wagner-Rousset, E., Colas, O., Ayoub, D., Corvaia, N., Van Dorsselaer, A., Beck, A. & Cianferani, S. (2013). Time Resolved Native Ion-Mobility Mass Spectrometry to Monitor Dynamics of IgG4 Fab Arm Exchange and "Bispecific" Monoclonal Antibody Formation. Anal. Chem. 85, 9785-9792. doi : http://dx.doi.org/10.1021/ac402237v.

Gillet, F. X., Cattoni, D. I., Petiot-Becard, S., Delalande, F., Poignavent, V., Brizard, J. P., Bessin, Y., Van Dorsselaer, A., Declerck, N., Sanglier-Cianferani, S., Brugidou, C. & Vignols, F. (2013). The RYMV-Encoded Viral Suppressor of RNA Silencing P1 Is a Zinc-Binding Protein with Redox-Dependent Flexibility. J. Mol. Biol. 425, 2423-2435. doi : http://dx.doi.org/10.1016/j.jmb.2013.03.028.

Gissot, M., Walker, R., Delhaye, S., Alayi, T. D., Huot, L., Hot, D., Callebaut, I., Schaeffer-Reiss, C., Van Dorsselaer, A. & Tomavo, S. (2013). Toxoplasma gondii Alba Proteins Are Involved in Translational Control of Gene Expression. J. Mol. Biol. 425, 1287-1301. doi : http://dx.doi.org/10.1016/j.jmb.2013.01.039.

Immekus, F., Barandun, L. J., Betz, M., Debaene, F., Petiot, S., Sanglier-Cianferani, S., Reuter, K., Diederich, F. & Klebe, G. (2013). Launching Spiking Ligands into a Protein Protein Interface : A Promising Strategy To Destabilize and Break Interface Formation in a tRNA Modifying Enzyme. ACS Chem. Biol. 8, 1163-1178. doi : http://dx.doi.org/10.1021/cb400020b.

Laventie, B. J., Potrich, C., Atmanene, C., Saleh, M., Joubert, O., Viero, G., Bachmeyer, C., Antonini, V., Mancini, I., Cianferani-Sanglier, S., Keller, D., Colin, D. A., Bourcier, T., Anderluh, G., Van Dorsselaer, A., Dalla Serra, M. & Prevost, G. (2013). p-Sulfonato-calix n arenes inhibit staphylococcal bicomponent leukotoxins by supramolecular interactions. Biochem. J 450, 559-571. doi : http://dx.doi.org/10.1042/bj20121628.

Mialoundama, A. S., Jadid, N., Brunel, J., Di Pascoli, T., Heintz, D., Erhardt, M., Mutterer, J., Bergdoll, M., Ayoub, D., Van Dorsselaer, A., Rahier, A., Nkeng, P., Geoffroy, P., Miesch, M., Camara, B. & Bouvier, F. (2013). Arabidopsis ERG28 Tethers the Sterol C4-Demethylation Complex to Prevent Accumulation of a Biosynthetic Intermediate That Interferes with Polar Auxin Transport. Plant Cell 25, 4879-4893. doi : http://dx.doi.org/10.1105/tpc.113.115576.

Miguet, L., Lennon, S., Baseggio, L., Traverse-Glehen, A., Berger, F., Perrusson, N., Chenard, M. P., Galoisy, A. C., Eischen, A., Mayeur-Rousse, C., Maar, A., Fornecker, L., Herbrecht, R., Felman, P., Van Dorsselaer, A., Carapito, C., Cianferani, S. & Mauvieux, L. (2013). Cell-surface expression of the TLR homolog CD180 in circulating cells from splenic and nodal marginal zone lymphomas. Leukemia 27, 1748-1750. doi : http://dx.doi.org/10.1038/leu.2013.3.

Nchimi-Nono, K., Wegner, K. D., Linden, S., Lecointre, A., Ehret-Sabatier, L., Shakir, S., Hildebrandt, N. & Charbonniere, L. J. (2013). Activated phosphonated trifunctional chelates for highly sensitive lanthanide-based FRET immunoassays applied to total prostate specific antigen detection. Org. Biomol. Chem. 11, 6493-6501. doi : http://dx.doi.org/10.1039/c3ob40898a.

Pierrat, P., Laverny, G., Creusat, G., Wehrung, P., Strub, J. M., Van Dorsselaer, A., Pons, F., Zuber, G. & Lebeau, L. (2013). Phospholipid-detergent conjugates as novel tools for siRNA delivery. Chem. Eur. J. 19, 2344-2355. doi : http://dx.doi.org/10.1002/chem.201203071.

Plumel, M. I., Wasselin, T., Plot, V., Strub, J. M., Van Dorsselaer, A., Carapito, C., Georges, J. Y. & Bertile, F. (2013). Mass Spectrometry-Based Sequencing and SRM-Based Quantitation of Two Novel Vitellogenin Isoforms in the Leatherback Sea Turtle (Dermochelys coriacea). J. Proteom. Res. 12, 4122-4135. doi : http://dx.doi.org/10.1021/pr400444m.

Prakasam, T., Lusi, M., Elhabiri, M., Platas-Iglesias, C., Olsen, J. C., Asfari, Z., Cianferani-Sanglier, S., Debaene, F., Charbonniere, L. J. & Trabolsi, A. (2013). Simultaneous self-assembly of a [2]catenane, a trefoil knot, and a Solomon link from a simple pair of ligands. Angew. Chem. Int. Ed. 52, 9956-9960. doi : http://dx.doi.org/10.1002/anie.201302425.

Rejon, J. D., Delalande, F., Schaeffer-Reiss, C., Carapito, C., Zienkiewicz, K., Alche, J. D., Rodriguez-Garcia, M. I., Van Dorsselaer, A. & Castro, A. J. (2013). Proteomics profiling reveals novel proteins and functions of the plant stigma exudate. J. Exp. Bot. 64, 5695-5705. doi : http://dx.doi.org/10.1093/jxb/ert345.

Triboulet, S., Aude-Garcia, C., Carriere, M., Diemer, H., Proamer, F., Habert, A., Chevallet, M., Collin-Faure, V., Strub, J. M., Hanau, D., Van Dorsselaer, A., Herlin-Boime, N. & Rabilloud, T. (2013). Molecular Responses of Mouse Macrophages to Copper and Copper Oxide Nanoparticles Inferred from Proteomic Analyses. Mol. Cell. Proteomics 12, 3108-3122. doi : http://dx.doi.org/10.1074/mcp.M113.030742.

Wagner-Rousset, E., Schaeffer-Reiss, C., Bednarczyk, A., Corvaïa, N., Van Dorsselaer, A. & Beck, A. (2013). NanoLC Chips MS/MS for the Characterization of N-Glycopeptides Generated from Trypsin Digestion of a Monoclonal Antibody Methods Mol. Biol. 988, 81-91. doi : http://dx.doi.org/10.1007/978-1-62703-327-5_6.

Walker, R., Gissot, M., Huot, L., Alayi, T. D., Hot, D., Marot, G., Schaeffer-Reiss, C., Van Dorsselaer, A., Kim, K. & Tomavo, S. (2013). Toxoplasma Transcription Factor TgAP2XI-5 Regulates the Expression of Genes Involved in Parasite Virulence and Host Invasion. J. Biol. Chem. 288, 31127-31138. doi : http://dx.doi.org/10.1074/jbc.M113.486589.

Yang, Z. B., Eticha, D., Fuhrs, H., Heintz, D., Ayoub, D., Van Dorsselaer, A., Schlingmann, B., Rao, I. M., Braun, H. P. & Horst, W. J. (2013). Proteomic and phosphoproteomic analysis of polyethylene glycol-induced osmotic stress in root tips of common bean (Phaseolus vulgaris L.). J. Exp. Bot. 64, 5569-5586. doi : http://dx.doi.org/10.1093/jxb/ert328.


2012

Angenieux, C., Waharte, F., Gidon, A., Signorino-Gelo, F., Wurtz, V., Hojeij, R., Proamer, F., Gachet, C., Van Dorsselaer, A., Hanau, D., Salamero, J. & De La Salle, H. (2012). Lysosomal-Associated Transmembrane Protein 5 (LAPTM5) Is a Molecular Partner of CD1e. Plos One 7, e42634. doi : http://dx.doi.org/10.1371/journal.pone.0042634.

Atmanene, C., Petiot-Becard, S., Zeyer, D., Van Dorsselaer, A., Hannah, V. V. & Sanglier-Cianferani, S. (2012). Exploring Key Parameters to Detect Subtle Ligand-Induced Protein Conformational Changes Using Traveling Wave Ion Mobility Mass Spectrometry. Anal. Chem. 84, 4703-4710. doi : http://dx.doi.org/10.1021/ac203223h.

Barthelemy, N. R., Bednarczyk, A., Schaeffer-Reiss, C., Jullien, D., Van Dorsselaer, A. & Cavusoglu, N. (2012). Proteomic tools for the investigation of human hair structural proteins and evidence of weakness sites on hair keratin coil segments. Anal. Biochem. 421, 43-55. doi : http://dx.doi.org/10.1016/j.ab.2011.10.011.

Beck, A., Sanglier-Cianferani, S. & Van Dorsselaer, A. (2012). Biosimilar, Biobetter, and Next Generation Antibody Characterization by Mass Spectrometry. Anal. Chem. 84, 4637-4646. doi : http://dx.doi.org/10.1021/ac3002885.

Bui the Thuong, M., Catala, C., Colas, C., Schaeffer, C., Van Dorsselaer, A., Mann, A. & Wagner, A. (2012). Trimethoxyarene as a Highly Ionizable Tag for Reaction Analysis by Atmospheric Pressure Photoionization Mass Spectrometry (APPI/MS) : Exploration of Heterocyclic Synthesis. Eur. J. Org. Chem., 85-92. doi : http://dx.doi.org/10.1002/ejoc.201100919.

Christine, C., Koubemba, M., Shakir, S., Clavier, S., Ehret-Sabatier, L., Saupe, F., Orend, G. & Charbonniere, L. J. (2012). Synthesis of an activated phosphonated bifunctional chelate with potential for PET imaging and radiotherapy. Org. Biomol. Chem. 10, 9183-9190. doi : http://dx.doi.org/10.1039/c2ob26452h.

Cousido-Siah, A., Ayoub, D., Berberian, G., Bollo, M., Van Dorsselaer, A., Debaene, F., Dipolo, R., Petrova, T., Schulze-Briese, C., Olieric, V., Esteves, A., Mitschler, A., Sanglier-Cianferani, S., Beauge, L. & Podjarny, A. (2012). Structural and functional studies of ReP1-NCXSQ, a protein regulating the squid nerve Na+/Ca2+ exchanger. Acta Crystallographica Section D Biological Crystallography 68, 1098-1107. doi : http://dx.doi.org/10.1107/s090744491202094x.

Cousido-Siah, A., Petrova, T., Hazemann, I., Mitschler, A., Ruiz, F. X., Howard, E., Ginell, S., Atmanene, C., Van Dorsselaer, A., Sanglier-Cianferani, S., Joachimiak, A. & Podjarny, A. (2012). Crystal packing modifies ligand binding affinity : The case of aldose reductase. Proteins 80, 2552-2561. doi : http://dx.doi.org/10.1002/prot.24136.

Halter, D., Goulhen-Chollet, F., Gallien, S., Casiot, C., Hamelin, J., Gilard, F., Heintz, D., Schaeffer, C., Carapito, C., Van Dorsselaer, A., Tcherkez, G., Arsene-Ploetze, F. & Bertin, P. N. (2012). In situ proteo-metabolomics reveals metabolite secretion by the acid mine drainage bio-indicator, Euglena mutabilis. Isme Journal 6, 1391-1402. doi : http://dx.doi.org/10.1038/ismej.2011.198.

Heintz, D., Gallien, S., Compagnon, V., Berna, A., Suzuki, M., Yoshida, S., Muranaka, T., Van Dorsselaer, A., Schaeffer, C., Bach, T. J. & Schaller, H. (2012). Phosphoproteome Exploration Reveals a Reformatting of Cellular Processes in Response to Low Sterol Biosynthetic Capacity in Arabidopsis. J. Proteom. Res. 11, 1228-1239. doi : http://dx.doi.org/10.1021/pr201127u.

Laux, A., Delalande, F., Mouheiche, J., Stuber, D., Dorsselaer, A., Bianchi, E., Bezard, E., Poisbeau, P. & Goumon, Y. (2012). Localization of endogenous morphine-like compounds in the mouse spinal cord. J. Comp. Neurol. 520, 1547-1561. doi : http://dx.doi.org/10.1002/cne.22811.

Laux-Biehlmann, A., Grafe, N., Mouheiche, J., Stuber, D., Welters, I. D., Delalande, F., Poisbeau, P., Garnero, P., Metz-Boutigue, M. H., Schneider, F. & Goumon, Y. (2012). Comparison of serum and lithium-heparinate plasma for the accurate measurements of endogenous and exogenous morphine concentrations. Br. J. Clin. Pharmacol. 74, 381-383. doi : http://dx.doi.org/10.1111/j.1365-2125.2012.04199.x.

Lelong, C., Chevallet, M., Diemer, H., Luche, S., Van Dorsselaer, A. & Rabilloud, T. (2012). Improved proteomic analysis of nuclear proteins, as exemplified by the comparison of two myeloid cell lines nuclear proteomes. J. Proteom. 77, 577-602. doi : http://dx.doi.org/10.1016/j.jprot.2012.09.034.

Mori, M., Schult-Dietrich, P., Szafarowicz, B., Humbert, N., Debaene, F., Sanglier-Cianferani, S., Dietrich, U., Mely, Y. & Botta, M. (2012). Use of virtual screening for discovering antiretroviral compounds interacting with the HIV-1 nucleocapsid protein. Virus Res. 169, 377-387. doi : http://dx.doi.org/10.1016/j.virusres.2012.05.011.

Patramool, S., Choumet, V., Surasombatpattana, P., Sabatier, L., Thomas, F., Thongrungkiat, S., Rabilloud, T., Boulanger, N., Biron, D. G. & Misse, D. (2012). Update on the proteomics of major arthropod vectors of human and animal pathogens. Proteomics 12, 3510-3523. doi : http://dx.doi.org/10.1002/pmic.201200300.

Reichardt, F., Chaumande, B., Habold, C., Robin, J. P., Ehret-Sabatier, L., Le Maho, Y., Liewig, N., Angel, F. & Lignot, J. H. (2012). Kaolinite ingestion facilitates restoration of body energy reserves during refeeding after prolonged fasting. Fundam. Clin. Pharmacol. 26, 577-588. doi : http://dx.doi.org/10.1111/j.1472-8206.2011.00989.x.

Renouf, B., Soret, C., Saandi, T., Delalande, F., Martin, E., Vanier, M., Duluc, I., Gross, I., Freund, J. N. & Domon-Dell, C. (2012). Cdx2 homeoprotein inhibits non-homologous end joining in colon cancer but not in leukemia cells. Nucleic Acids Res. 40, 3456-3469. doi : http://dx.doi.org/10.1093/nar/gkr1242.

Sloves, P. J., Delhaye, S., Mouveaux, T., Werkmeister, E., Slomianny, C., Hovasse, A., Alayi, T. D., Callebaut, I., Gaji, R. Y., Schaeffer-Reiss, C., Van Dorsselear, A., Carruthers, V. B. & Tomavo, S. (2012). Toxoplasma Sortilin-like Receptor Regulates Protein Transport and Is Essential for Apical Secretory Organelle Biogenesis and Host Infection. Cell Host Microb. 11, 515-527. doi : http://dx.doi.org/10.1016/j.chom.2012.03.006.

Spagnolo, A., Magnin-Robert, M., Alayi, T. D., Cilindre, C., Mercier, L., Schaeffer-Reiss, C., Van Dorsselaer, A., Clement, C. & Fontaine, F. (2012). Physiological Changes in Green Stems of Vitis vinifera L. cv. Chardonnay in Response to Esca Proper and Apoplexy Revealed by Proteomic and Transcriptomic Analyses. J. Proteom. Res. 11, 461-475. doi : http://dx.doi.org/10.1021/pr200892g.

Vercruysse, T., Basta, B., Dehaen, W., Humbert, N., Balzarini, J., Debaene, F., Sanglier-Cianferani, S., Pannecouque, C., Mely, Y. & Daelemans, D. (2012). A phenyl-thiadiazolylidene-amine derivative ejects zinc from retroviral nucleocapsid zinc fingers and inactivates HIV virions. Retrovirol. 9, 95. doi : http://dx.doi.org/10.1186/1742-4690-9-95.

Voinot, F., Fischer, C., Bœuf, A., Schmidt, C., Delval-Dubois, V., Reichardt, F., Liewig, N., Chaumande, B., Ehret-Sabatier, L., Lignot, J. H. & Angel, F. (2012). Effects of controlled ingestion of kaolinite (5%) on food intake gut morphology and in vitro motility in rats. Fundam. Clin. Pharmacol. 26, 565-576. doi : http://dx.doi.org/10.1111/j.1472-8206.2011.00978.x.

Woldt, E., Terrand, J., Mlih, M., Matz, R. L., Bruban, V., Coudane, F., Foppolo, S., El Asmar, Z., Chollet, M. E., Ninio, E., Bednarczyk, A., Thierse, D., Schaeffer, C., Van Dorsselaer, A., Boudier, C., Wahli, W., Chambon, P., Metzger, D., Herz, J. & Boucher, P. (2012). The nuclear hormone receptor PPAR gamma counteracts vascular calcification by inhibiting Wnt5a signalling in vascular smooth muscle cells. Nat. Commun. 3, 1077. doi : http://dx.doi.org/10.1038/ncomms2087.


2011

Bertile, F. & Raclot, T. (2011). ATGL and HSL are not coordinately regulated in response to fuel partitioning in fasted rats. J. Nutr. Biochem. 22, 372-379. doi : http://dx.doi.org/10.1016/j.jnutbio.2010.03.005.

Bertin, P. N., Heinrich-Salmeron, A., Pelletier, E., Goulhen-Chollet, F., Arsene-Ploetze, F., Gallien, S., Lauga, B., Casiot, C., Calteau, A., Vallenet, D., Bonnefoy, V., Bruneel, O., Chane-Woon-Ming, B., Cleiss-Arnold, J., Duran, R., Elbaz-Poulichet, F., Fonknechten, N., Giloteaux, L., Halter, D., Koechler, S., Marchal, M., Mornico, D., Schaeffer, C., Smith, A. a. T., Van Dorsselaer, A., Weissenbach, J., Medigue, C. & Le Paslier, D. (2011). Metabolic diversity among main microorganisms inside an arsenic-rich ecosystem revealed by meta- and proteo-genomics. Isme Journal 5, 1735-1747. doi : http://dx.doi.org/10.1038/ismej.2011.51.

Bisse, E., Hovasse, A., Preisler-Adams, S., Epting, T., Wagner, O., Kogel, G., Van Dorsselaer, A. & Schaeffer-Reiss, C. (2011). Hb Riesa or beta 93 (F9) Cys -> Ser, a new electrophoretically silent haemoglobin variant interfering with haemoglobin A1c measurement. J. Chromatogr. B 879, 2952-2956. doi : http://dx.doi.org/10.1016/j.jchromb.2011.08.016.

Boehler, C., Gauthier, L. R., Mortusewicz, O., Biard, D. S., Saliou, J. M., Bresson, A., Sanglier-Cianferani, S., Smith, S., Schreiber, V., Boussin, F. & Dantzer, F. (2011). Poly(ADP-ribose) polymerase 3 (PARP3), a newcomer in cellular response to DNA damage and mitotic progression. PNAS 108, 2783-2788. doi : http://dx.doi.org/10.1073/pnas.1016574108.

Borchani, L., Sassi, A., Shahbazzadeh, D., Strub, J. M., Tounsi-Guetteti, H., Boubaker, M. S., Akbari, A., Van Dorsselaer, A. & El Ayeb, M. (2011). Heminecrolysin, the first hemolytic dermonecrotic toxin purified from scorpion venom. Toxicon 58, 130-139. doi : http://dx.doi.org/10.1016/j.toxicon.2011.05.016.

Bruneel, O., Volant, A., Gallien, S., Chaumande, B., Casiot, C., Carapito, C., Bardil, A., Morin, G., Brown, G. E., Personne, C. J., Le Paslier, D., Schaeffer, C., Van Dorsselaer, A., Bertin, P. N., Elbaz-Poulichet, F. & Arsene-Ploetze, F. (2011). Characterization of the Active Bacterial Community Involved in Natural Attenuation Processes in Arsenic-Rich Creek Sediments. Microb. Ecol. 61, 793-810. doi : http://dx.doi.org/10.1007/s00248-011-9808-9.

Catusse, J., Meinhard, J., Job, C., Strub, J. M., Fischer, U., Pestsova, E., Westhoff, P., Van Dorsselaer, A. & Job, D. (2011). Proteomics reveals potential biomarkers of seed vigor in sugarbeet. Proteomics 11, 1569-1580. doi : http://dx.doi.org/10.1002/pmic.201000586.

Charron, G., Doudnikoff, E., Laux, A., Berthet, A., Porras, G., Canron, M. H., Barroso-Chinea, P., Li, Q., Qin, C., Nosten-Bertrand, M., Giros, B., Delalande, F., Van Dorsselaer, A., Vital, A., Goumon, Y. & Bezard, E. (2011). Endogenous morphine-like compound immunoreactivity increases in parkinsonism. Brain 134, 2321-2338. doi : http://dx.doi.org/10.1093/brain/awr166.

Chevreux, G., Atmanene, C., Lopez, P., Ouazzani, J., Van Dorsselaer, A., Badet, B., Badet-Denisot, M. A. & Sanglier-Cianferani, S. (2011). Monitoring the Dynamics of Monomer Exchange Using Electrospray Mass Spectrometry : The Case of the Dimeric Glucosamine-6-Phosphate Synthase. J. Am. Soc. Mass. Spectrom. 22, 431-439. doi : http://dx.doi.org/10.1007/s13361-010-0054-z.

Destouches, D., Page, N., Hamma-Kourbali, Y., Machi, V., Chaloin, O., Frechault, S., Birmpas, C., Katsoris, P., Beyrath, J., Albanese, P., Maurer, M., Carpentier, G., Strub, J. M., Van Dorsselaer, A., Muller, S., Bagnard, D., Briand, J. P. & Courty, J. (2011). A Simple Approach to Cancer Therapy Afforded by Multivalent Pseudopeptides That Target Cell-Surface Nucleoproteins. Cancer Res. 71, 3296-3305. doi : http://dx.doi.org/10.1158/0008-5472.can-10-3459.

Eddabra, R., Moussaoui, W., Prevost, G., Delalande, F., Van Dorsselaer, A., Meunier, O., Scheftel, J. M. & Mimouni, R. (2011). Occurrence of Vibrio cholerae non-O1 in three wastewater treatment plants in Agadir (Morocco). World J. Microb. Biot. 27, 1099-1108. doi : http://dx.doi.org/10.1007/s11274-010-0556-7.

Fauquenoy, S., Hovasse, A., Sloves, P. J., Morelle, W., Ayali, T. D., Slomianny, C., Werkmeister, E., Schaeffer, C., Van Dorsselaer, A. & Tomavo, S. (2011). Unusual N-glycan Structures Required for Trafficking Toxoplasma gondii GAP50 to the Inner Membrane Complex Regulate Host Cell Entry Through Parasite Motility. Mol. Cell. Proteomics 10, M111.008953. doi : http://dx.doi.org/10.1074/mcp.M111.008953.

Fournier, I., Gaucher, D., Chich, J. F., Bach, C., Shooshtarizadeh, P., Picaud, S., Bourcier, T., Speeg-Schatz, C., Strub, J. M., Van Dorsselaer, A., Corti, A., Aunis, D. & Metz-Boutigue, M. H. (2011). Processing of chromogranins/secretogranin in patients with diabetic retinopathy. Regul. Peptides 167, 118-124. doi : http://dx.doi.org/10.1016/j.regpep.2010.12.004.

Halter, D., Cordi, A., Gribaldo, S., Gallien, S., Goulhen-Chollet, F., Heinrich-Salmeron, A., Carapito, C., Pagnout, C., Montaut, D., Seby, F., Van Dorsselaer, A., Schaeffer, C., Bertin, P. N., Bauda, P. & Arsene-Ploetze, F. (2011). Taxonomic and functional prokaryote diversity in mildly arsenic-contaminated sediments. Res. Microbiol. 162, 877-887. doi : http://dx.doi.org/10.1016/j.resmic.2011.06.001.

Herquel, B., Ouararhni, K., Khetchoumian, K., Ignat, M., Teletin, M., Mark, M., Bechade, G., Van Dorsselaer, A., Sanglier-Cianferani, S., Hamiche, A., Cammas, F., Davidson, I. & Losson, R. (2011). Transcription cofactors TRIM24, TRIM28, and TRIM33 associate to form regulatory complexes that suppress murine hepatocellular carcinoma. PNAS 108, 8212-8217. doi : http://dx.doi.org/10.1073/pnas.1101544108.

Hispard, F., De Vaufleury, A., Schaeffer, C., Scheifler, R., Badot, P. M., Richert, L. & Martin, H. (2011). Differential liver proteome mapping of control and cadmium-fed rats. Ecotoxicol. Environ. Saf. 74, 576-583. doi : http://dx.doi.org/10.1016/j.ecoenv.2010.07.038.

Iehl, J., Holler, M., Nierengarten, J. F., Yoosaf, K., Malicka, J. M., Armaroli, N., Strub, J. M., Van Dorsselaer, A. & Delavaux-Nicot, B. (2011). Photo-induced Energy Transfer in a T-h-Symmetrical Hexakis-adduct of C-60 Substituted with pi-Conjugated Oligomers. Aust. J. Chem. 64, 153-159. doi : http://dx.doi.org/10.1071/ch10319.

Iehl, J., Vartanian, M., Holler, M., Nierengarten, J. F., Delavaux-Nicot, B., Strub, J. M., Van Dorsselaer, A., Wu, Y. L., Mohanraj, J., Yoosaf, K. & Armaroli, N. (2011). Photoinduced electron transfer in a clicked fullerene-porphyrin conjugate. J. Mater. Chem. 21, 1562-1573. doi : http://dx.doi.org/10.1039/c0jm02310h.

Jadid, N., Mialoundama, A. S., Heintz, D., Ayoub, D., Erhardt, M., Mutterer, J., Meyer, D., Alioua, A., Van Dorsselaer, A., Rahier, A., Camara, B. & Bouvier, F. (2011). DOLICHOL PHOSPHATE MANNOSE SYNTHASE1 Mediates the Biogenesis of Isoprenyl-Linked Glycans and Influences Development, Stress Response, and Ammonium Hypersensitivity in Arabidopsis. Plant Cell 23, 1985-2005. doi : http://dx.doi.org/10.1105/tpc.111.083634.

Laux, A., Muller, A. H., Miehe, M., Dirrig-Grosch, S., Deloulme, J. C., Delalande, F., Stuber, D., Sage, D., Van Dorsselaer, A., Poisbeau, P., Aunis, D. & Goumon, Y. (2011). Mapping of Endogenous Morphine-Like Compounds in the Adult Mouse Brain : Evidence of Their Localization in Astrocytes and GABAergic Cells. J. Comp. Neurol. 519, 2390-2416. doi : http://dx.doi.org/10.1002/cne.22633.

Losada, S., Sabatier, L., Hammann, P., Guillier, C., Matos, C., Bermudez, H., Lorenzo, M. A. & Noya, O. (2011). A combined proteomic and immunologic approach for the analysis of Schistosoma mansoni cercariae and adult worm protein extracts and the detection of one of the vaccine candidates, Sm28GST, from a Venezuelan parasite isolate. Investigacion Clinica 52, 121-139.

Marchand, V., Santerre, M., Aigueperse, C., Fouillen, L., Saliou, J. M., Van Dorsselaer, A., Sanglier-Cianferani, S., Branlant, C. & Motorin, Y. (2011). Identification of protein partners of the human immunodeficiency virus 1 tat/rev exon 3 leads to the discovery of a new HIV-1 splicing regulator, protein hnRNP K. RNA Biol. 8, 325-342. doi : http://dx.doi.org/10.4161/rna.8.2.13984.

Olguin-Lamas, A., Madec, E., Hovasse, A., Werkmeister, E., Callebaut, I., Slomianny, C., Delhaye, S., Mouveaux, T., Schaeffer-Reiss, C., Van Dorsselaer, A. & Tomavo, S. (2011). A Novel Toxoplasma gondii Nuclear Factor TgNF3 Is a Dynamic Chromatin-Associated Component, Modulator of Nucleolar Architecture and Parasite Virulence. Plos Pathogens 7, e1001328. doi : http://dx.doi.org/10.1371/journal.ppat.1001328.

Rode, C., Gallien, S., Heintz, D., Van Dorsselaer, A., Braun, H. P. & Winkelmann, T. (2011). Enolases : storage compounds in seeds ? Evidence from a proteomic comparison of zygotic and somatic embryos of Cyclamen persicum Mill. Plant Mol. Biol. 75, 305-319. doi : http://dx.doi.org/10.1007/s11103-010-9729-x.

Van Dorsselaer, A., Carapito, C., Delalande, F., Schaeffer-Reiss, C., Thierse, D., Diemer, H., Mcnair, D. S., Krewski, D. & Cashman, N. R. (2011). Detection of Prion Protein in Urine-Derived Injectable Fertility Products by a Targeted Proteomic Approach. Plos One 6, e17815. doi : http://dx.doi.org/10.1371/journal.pone.0017815.


2010

N. Vitale, D. Thierse and M.-F. Bader
Melittin promotes exocytosis in neuroendocrine cells through the activation of phospholipase A(2).
2010,Regulatory Peptides 111-116

A. Charlet, A. H. Muller, A. Laux , V. Kemmel, A. Schweitzer, J. C. Deloulme, D. Stuber, F. Delalande, E. Bianchi, A. Van Dorsselaer, D. Aunis, A. Andrieux, P. Poisbeau and Y. Goumon
Abnormal nociception and opiate sensitivity of STOP null mice exhibiting elevated levels of the endogenous alkaloid morphine.
2010,Mol. Pain,96

A. Gharbi-Ayachi, J.-C. Labbe, A. Burgess, S. Vigneron, J.-M. Strub, E. Brioudes, A. Van-Dorsselaer, A. Castro and T. Lorca
The Substrate of Greatwall Kinase, Arpp19, Controls Mitosis by Inhibiting Protein Phosphatase 2A
2010,Science,1673-1677

M. Zimmermann, C. Atmanene, Q. Xu, L. Fouillen, A. B. Van Dorsselaer, D., C. Marsol, M. Hibert, S. Sanglier-Cianferani, C. Pigault, L. K. McNamara, D. M. Watterson, J. Haiech and M. C. Kilhoffer
Homodimerization of the death-associated protein kinase catalytic domain : development of a new small molecule fluorescent reporter
2010,PLoS ONE,e14120

G. Budin, M. Moune-Dimala, G. Leriche, J. Saliou, J. Papillon, S. Sanglier-Cianférani, A. Van Dorsselaer, V. Lamour, L. Brino and A. Wagner
Nondenaturing chemical proteomics for protein complex isolation and identification
2010,Chembiochem,2359-2361

M. Trabalon, C. Carapito, F. Voinot, J. Martrette, A. Van Dorsselaer, C. Gilbert and F. Bertile
Differences in Brachypelma albopilosa (theraphosidae) hemolymph proteome between subadult and adult females.
2010,J. Exp. Zool. A Ecol. Genet. Physiol.,651-659

D. Chaix, M. Ferguson, C. Atmanene, A. Van Dorsselaer, S. Sanglier-Cianferani, C. Royer and N. Declerck
Physical basis of the inducer-dependent cooperativity of the CggR repressor/DNA complex
2010,Nucleic Acids Res.,5944-5957

K. Eckert, J. Saliou, L. Monlezun, A. Vigouroux, N. Atmane, C. Caillat, S. Quevillon-Chéruel, K. Madiona, M. Niçaise, S. Lazereg, A. Van Dorsselaer, S. Sanglier-Cianférani, P. Meyer and S. Moréra
The Pih1-Tah1 cochaperone complex inhibits Hsp90 molecular chaperone ATPase activity.
2010,J. Biol. Chem.,31304-31312

R. Mastrangeli, C. Carapito, C. Schaeffer-Reiss, D. Thierse, H. Diemer, R. Sanvito and A. Van Dorsselaer
Prion protein identified in urinary gonadotrophin preparation
2010,Reproductive Medecine and Endocrinology 277

L. Fouillen, W. Abdulrahman, D. Moras, A. Van Dorsselaer, A. Poterszman and S. Sanglier-Cianférani
Analysis of recombinant phosphoprotein complexes with complementary mass spectrometry approaches
2010,Anal. Biochem.,34-43

H. Fuhrs, C. Behrens, S. Gallien, D. Heintz, A. Van Dorsselaer, H.-P. Braun and W. J. Horst
Physiological and proteomic characterization of manganese sensitivity and
tolerance in rice (Oryza sativa) in comparison with barley (Hordeum vulgare)

2010,Ann. Bot.,1129-40

B. Ossareh-Nazari, M. Bonizec, M. Cohen, S. Dokudovskaya, F. Delalande, C. Schaeffer, A. Van Dorsselaer and C. Dargemont
Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy
2010,EMBO Rep.,548-54

S. Revollon, J. Strub, A. Fitchette, L. Wiss, V. Gomord, A. Van Dorsselaer and V. Brault
A reinvestigation provides no evidence for sugar residues on structural proteins of poleroviruses and argues against a role for glycosylation of virus structural proteins in aphid transmission
2010,Virology,303-314

C. Atmanene, D. Chaix, Y. Bessin, N. Declerck, A. Van Dorsselaer and S. Sanglier-Cianferani
Combination of Noncovalent Mass Spectrometry and Traveling Wave Ion Mobility Spectrometry Reveals Sugar-Induced Conformational Changes of CggR / DNA Complex
2010,Anal. Chem.,3597-605

H. Samaha, V. Delorme, F. Pontvianne, R. Cooke, F. Delalande, A. Van Dorsselaer, M. Echeverria and J. Saez Vasquez
Identification of protein factors and U3 snoRNAs from a B. oleracea RNP complex involved in processing of pre-rRNA
2010,Plant Journal,383-98

L. Babujee, V. Wurtz, C. Ma, F. Lueder, P. Soni, A. Van Dorsselaer and S. Reumann
The proteome map of spinach leaf peroxisomes indicates partial compartmentalization of phylloquinone (vitamin K1) biosynthesis in plant peroxisomes.
2010,J. Exp. Bot. ,1441-53

A. Castro, A. Bednarczyk, C. Schaeffer-Reiss, M. Rodríguez-García, A. van Dorsselaer and J. de Dios Alché
Screening of Ole e 1 polymorphism among olive cultivars by peptide mapping and N-glycopeptide analysis.
2010,Proteomics,953–962

A. Akaddar, C. Doderer-Lang, M. R. Marzahn, F. Delalande, M. Mousli, K. Helle, A. Van Dorsselaer, D. Aunis, B. M. Dunn, M.-H. Metz-Boutigue and E. Candolfi
Catestatin, an endogenous Chromogranin A–derived peptide, inhibits in vitro growth of Plasmodium falciparum
2010,Cell. Mol. Life Sci.,1005-15

E. Glattard, I. D. Welters, T. Lavaux, A. H. Muller, A. Laux, D. Zhang, A. R. Schmidt, F. Delalande, B. J. Laventie, S. Dirrig-Grosch, D. A. Colin, A. Van Dorsselaer, D. Aunis, M. H. Metz-Boutigue, F. Schneider and Y. Goumon
Endogenous morphine levels are increased in sepsis : a partial implication of neutrophils.
2010,PLoS ONE,e8791.

Y. Kuhn, C. Sanchez, D. Ayoub, T. Saridaki, A. van Dorsselaer and M. Lanzer
Trafficking of the Phosphoprotein PfCRT to the Digestive Vacuolar Membrane in Plasmodium falciparum.
2010,Traffic,236-49

S. Maenner, M. Blaud, L. Fouillen, A. Savoye, V. Marchand, A. Dubois, S. Sanglier-Cianférani, A. Van Dorsselaer, P. Clerc, P. Avner, A. Visvikis and C. Branlant
2D structure of the A region of Xist RNA and its implication for PRC2 association
2010,PLoS Biol. ,e1000276

V. Vivat Hannah, C. Atmanene, D. Zeyer, A. Van Dorsselaer and S. Sanglier-Cianférani
Native MS : an ‘ESI’ way to support structure- and fragment-based drug discovery
2010,Future Med. Chem.,35-50

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